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Gaius Therapeutics — Internal Tools
Epitonium Pipeline
census
steps 1–2
Survey literature and databases, identify cell types and data sources, scaffold the project repo and GCS paths. LLM agent chat interface.
in progress
chromia
steps 2–3
Peak calling and switch discovery. Grouping table editor, pipeline job launcher, accessibility ratio configuration.
planned
signum
step 4
Annotation pipeline manager. Tracks completeness of all annotation types (TF binding, GWAS, eQTL, caQTL, P2G, CRISPR) per project.
planned
cursus
step 5
Ranking explorer and evaluator. Recall@k / MRR dashboard, feature weight tuning, ranked list vs. known validated switches.
planned
locus
step 6
Candidate review and selection. Genomic browser (IGV.js), annotated candidate table, sequence view, selected shortlist.
in progress
nexus
step 7
Sequence design and optimization. Greedy substitution UI, ChromBPNet oracle, diffusion model interface.
planned
Company Tools
Runway Tracker
Cash flow, burn rate, and runway visualization with variance bands.
built
Competitive Landscape
CAR-Treg companies, trial phases, readout dates, and mechanism notes.
planned
IND Milestone Roadmap
Gantt-style view across preclinical, manufacturing, and regulatory workstreams.
planned
Fundraising Pipeline
Investor tracking — stage, check size, timeline, last contact.
planned
Patent Landscape
Freedom-to-operate tracker — claims, expiration, relevance scoring.
planned
SBIR / Grant Tracker
NIH, NSF, DoD deadlines, amounts, fit scores, and status.
planned